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©2017 by Biomicrofluidics Laberatory

Peer Reviewed Journal Publications

2018

  1. Celebi, A. T., Barisik, M., & Beskok, A., "Surface charge-dependent transport of water in graphene nano-channels," Microfluidics and Nanofluidics, 22(1), 7.

  2. Mansoorifar, A., Koklu, A., Ma, S., Raj, G. V., & Beskok, A., "Electrical Impedance Measurements of Biological Cells in Response to External Stimuli," Analytical chemistry, 90(7), 4320-4327.

  3. Sabuncu, A. C., Shen, J., Zaki, M. H., & Beskok, A., "Changes in the dielectric spectra of murine colon during neoplastic progression," Biomedical Physics & Engineering Express, 4(3), 035003.

  4. Celebi, A. T., & Beskok, A., "Molecular and Continuum Transport Perspectives on Electroosmotic Slip Flows," The Journal of Physical Chemistry C.

 

2017

  1. Koklu*, A., Sabuncu*, A.C., Beskok, A., “Enhancement of Dielectrophoresis Using Fractal Gold Nanostructured Electrodes,” Electrophoresis, 10.1002/elps.201600456, 2017.

  2. Mansourifar*, A., Koklu*, A., Sabuncu*, A.C., Beskok, A., “Dielectrophoresis Assisted Loading and Unloading of Micro-Wells for Impedance Spectroscopy,” Electrophoresis, 10.1002/elps.201700020, 2017.

  3. Ghorbanian*, J., and Beskok, A., “Temperature Profiles and Heat Fluxes Observed in Molecular Dynamics Simulations of Force-Driven Liquid Flows,” Physical Chemistry Chemical Physics, 19, 10317 - 10325, 2017.

  4. Koklu*, A., Li, J, Sengor, S., Beskok, A., “Pressure‑driven water flow through hydrophilic alumina nanomembranes,” Microfluidics Nanofluidics 21:124, 2017.

  5. Mansourifar*, A., Ghosh, A., Sabuncu*, A.C., Beskok, A., “Accuracy of the Maxwell–Wagner and the Bruggeman–Hanai mixture models for single cell dielectric spectroscopy,” IET Nanobiotechnology, 11(7) p. 874 – 882, 2017.   

2016

  1. Barisik*, M., and Beskok, A., “‘Law of the Nano-Wall’ in Nano-Channel Gas Flows,” Microfluidics and Nanofluidics, 20:46, 2016.

  2. Koklu*, A., Sabuncu*, A.C., Beskok, A., “Rough Gold Electrodes for Decreasing Impedance at the Electrolyte/Electrode Interface,” Electrochimica Acta 205 215-225, 2016.

  3. Ghorbanian*, J., and Beskok, A., “Scale Effects in Nano-Channel Liquid Flows,” Microfluidics and Nanofluidics 20:121, 2016.

  4. Ghorbanian*, J., Celebi*, A., and Beskok, A., “A Phenomenological Continuum Model for Force-Driven Nano-Channel Liquid Flows,” Journal of Chemical Physics, 145, 184109, 2016.

  5. Fernandez‡, R.E., Koklu*, A., Mansoorifar*, A., Beskok, A., “Platinum black electrodeposited thread based electrodes for dielectrophoretic assembly of microparticles,” Biomicrofluidics 10, 033101, 2016.

2015

  1. Barisik*, M., Beskok, A., “Molecular Free Paths in Nano-Scale Gas Flows,” Microfluidics and Nanofluidics, DOI: 10.1007/s10404-014-1535-3, 2015.

  2. Sabuncu* A.C., Asmar A.J., Michael Stacey, and Beskok, A., “Differential dielectric responses of chondrocyte and jurkat cells in electromanipulation buffers” Electrophoresis,  DOI: 10.1002/elps.201500119, 2015.

  3. Lebiga*, E., Fernandez‡, R.E., and Beskok, A., “Confined chemiluminescence detection of nanomolar levels of H2O2 in a paper–plastic disposable microfluidic device using a smartphone,” Analyst, DOI: 10.1039/c5an00720h, 2015.

  4. Fernandez‡, R.E., Lebiga*, E, Koklu, A., Sabuncu, A.C., Beskok, A., “Flexible Bioimpedance Sensor for Label-Free Detection of Cell Viability and Biomass,” IEEE Transactions on NanoBioscience, 10.1109/TNB.2015.2451594, 2015.

2014

  1. Sabuncu*, A.C., Stacey, M.W., Beskok, A., “Dielectric Characterization of Costal Cartilage Chondrocytes,” Biochimica et Biophysica Acta. 1840(1), Pages 146–152, 2014.

  2. Barisik*, M., Beskok, A., “Temperature Dependence of Thermal Resistance at the Water/Silicon Interface,” International Journal of Thermal Sciences, 77 47-54, 2014.

  3. Barisik*, M., Atalay*, S., Beskok, A., Qian, S., “Size Dependent Surface Charge Properties of Silica Nanoparticles,” Journal of Physical Chemistry Part C, DOI: 10.1021/jp410536n, 2014.

  4. Barisik*, M., Beskok, A., “Scale Effects in Gas Nano Flows,” Physics of Fluids, 26, 052003 doi: 10.1063/1.4874678, 2014.

  5. Atalay*, S., Barisik*, M., Beskok, A., Qian, S., “Surface Charge of a Nanoparticle Interacting with a Flat Substrate,” J. Phys. Chem. C. DOI: 10.1021/jp5023554, 2014. 

  6. Canpolat*, C, Qian, S., Beskok, A., “Induced-Charge Electro-osmosis of Polymer-Containing Fluid around a Metallic Rod Microfluidics and Nanofluidics,” Microfluidics and Nanofluidics, DOI 10.1007/s10404-013-1204-y, 6:247–255, 2014.

2013

  1. Canpolat*, C, Qian, S., Beskok, A., “Micro-PIV Measurements of Induced-Charge Electro-osmosis Around a Metal Rod,” Microfluidics and Nanofluidics, 10.1007/s10404-012-1033-4, Volume: 14   Issue: 1-2   Pages: 153-162   2013.

  2. Stacey M, Dutta*, D., Cao W, Asmar A, Elsayed-Ali H, Kelly Jr R, Beskok A, “Atomic Force Microscopy Characterization of Collagen ‘Nanostraws’ in Costal Cartilage,” Micron, 44, 483–487, 10.1016/j.micron.2012.10.006, 2013.

  3. Canpolat*, C, Zhang, M., Rosen*, W., Qian, S., Beskok, A., “Induced-Charge Electro-osmosis Around Touching Metal Rods,” J Fluids Eng- Trans ASME, 021103, (135), 2013.

  4. Sabuncu* A.C. and Beskok, A., “A Separability Parameter for Dielectrophoretic Cell Separation” Electrophoresis, 34:7 pp: 1051-1058, DOI: 10.1002/ elps201200411, 2013.

  5. Barisik*, M., and Beskok, A., “Wetting Characterization of Silicon (1,0,0) Surface,” Molecular Simulation, doi:10.1080/08927022.2012.758854, 2013.

  6. Gu, W., Cheng, P., Ghosh*, A., Liao, Y., Liao, B., Beskok, A., and Hao, Z., “Detection of distributed static and dynamic loads with electrolyte-enabled distributed transducers in a polymer-based microfluidic device,” J. Micromech. Microeng. 23 035015 doi:10.1088/0960-1317/23/3/035015, 2013.

  7. Cheng, P., Gu, W., Shen, J.Y., Ghosh*, A., Beskok, A., and Hao, Z., “Performance study of a PDMS-based microfluidic device for the detection of continuous distributed static and dynamic loads,” J. Micromech. Microeng. 23:8 085007 doi: 10.1088/0960-1317/23/8/085007   2013.

2012

  1. Sabuncu*, A.C., Grubbs, J., Qian, S., Abdel-Fattah., T.M., Stacey, M.W., Beskok, A., “Probing nanoparticle interactions in cell culture media,” Colloids and Surfaces B: Biointerfaces, 95 96-102, 2012.

  2. Beskok, A., Raisee, M., Celik‡, B., Yagiz, B., and Cheragli, M., “Heat transfer enhancement in a straight channel via a rotationally oscillating adiabatic cylinder,” International Journal of Thermal Sciences, 58, 61-69, 2012.

  3. Stacey, M.W., Grubb, J., Asmar, A., Pryor. J., El-Sayed Ali, H., Cao, W., Beskok, A., Dutta*, D., Darby, D.A., Fecteau, A., Werner, A., Kelly, R.E. Jr.,  “Decorin Expression, Straw-like Structure, and Differentiation of Human Costal Cartilage,” Connective Tissue Research, 10.3109/03008207.2012.684113, 2012

  4. Shi*, Z., Barisik*, M., and Beskok, A., “Molecular Dynamics Modeling of Thermal Resistance at Argon-Graphite and Argon-Silver Interfaces,” International Journal of Thermal Sciences, 59 29-37, 2012.

  5. Barisik*, M., Beskok, A., “Surface-Gas Interaction Effects on Nanoscale Gas Flows,” Microfluidics and Nanofluidics, 2012, DOI: 10.1007/s10404-012-1000-0, 2012.

  6. Sabuncu*, A.C., Zhuang, J., Kolb, J.F., Beskok, A., “Microfluidic Impedance Spectroscopy as a Tool for Quantitative Biology and Biotechnology,” Biomicrofluidics, 6: pp 034103 1- 15, 2012.

  7. Barisik*, M., and Beskok, A., “Boundary Treatment Effects on Molecular Dynamics Simulations of Interface Thermal Resistance,” Journal of Computational Physics, pp. 7881-7892, 10.1016/j.jcp.2012.07.026, 2012.

2011

  1. Barisik*, M., Beskok, A., “Equilibrium Molecular Dynamics Studies on Nanoscale-Confined Fluids,” Microfluidics and Nanofluidics, DOI 10.1007/s10404-011-0794-5, 2011.

  2. Barisik*, M., Beskok, A., “Molecular Dynamics Simulations of Shear Driven Gas Flows in Nano-Channels,” Microfluidics and Nanofluidics, DOI: 10.1007/s10404-011-0827-0, 2011.

2010

  1. Kim*, B., Beskok, A., Cagin, T. “Viscous Heating in Nanoscale Shear Driven Liquid Flows,” Microfluidics and Nanofluidics, DOI 10.1007/s10404-009-0515-5, 9:31-40, 2010.

  2. Celik‡, B., Raisee M., Beskok, A., “Heat transfer enhancement in a slot channel via a transversely oscillating adiabatic circular cylinder,” International Journal of Heat and Mass Transfer, 53: 626-634, 2010.

  3. Ai, Y., Park*, S., Zhu, J., Xuan, X., Beskok, A., and Qian, S., “DC Electrokinetic Particle Transport in an L-shaped Microchannel,” Langmuir, 26(4), 2937-2944, 2010.

  4. Barisik*, M., Kim*, B., Beskok, A., “Smart Wall Model for Molecular Dynamics Simulations of Nanoscale Gas Flows,” Communications in Computational Physics, 7(5): pp 977-993, 2010.

  5. Luo, X., Beskok, A., and Karniadakis, G.E., “Modeling Electrokinetic Flows by Smoothed Profile Techniques,” J. Comp. Physics, 229: pp 3828-3847, 2010.

  6. Sabuncu*, A.C., Kalluri, B.S., Qian, S., Stacey, M., Beskok, A., “Dispersion state and toxicity of mwCNTs in cell culture medium with different T80 concentrations,” Colloids and Surfaces B, 78, pp 36-43, 2010.

  7. Kim*, H.J., Beskok, A., “An Algebraic Factorization Scheme for Spectral Element Solution of Incompressible Fluid Flow and Scalar Transport,” International Journal of Computational Fluid Dynamics, 24(3-4) 95-108, 2010.

  8. Sabuncu*, A.C., Liu, J.A., Beebe, S.J., and Beskok, A., “Dielectrophoretic assessment of mouse melanoma clones,” Biomicrofluidics, 4(2), 021101, 2010. (Also featured in the July 1, 2010 issue of Virtual Journal of Biological Physics Research).

  9. Ai, Y., Yalcin, S.E., Gu, D., Baysal, O., Baumgart, H, Qian, S., Beskok, A., “A Low-Voltage Nano-Porous Electroosmotic Pump,” Journal of Colloid and Interface Science, 350, 465-470, 2010.

  10. Koklu‡, M., Park‡, S., Pillai, S.D., Beskok, A., “Negative Dielectrophoretic Capture of Bacterial Spores in Food Matrices,” Biomicrofluidics, 4, 034107, 2010. (Also featured in the September 1, 2010 issue of Virtual Journal of Biological Physics Research).

  11. Koklu‡, M., Sabuncu*, A.C., Beskok, A., “Acoustophoresis in Shallow Microchannels,” Journal of Colloid and Interface Science, 351, 407-414, 2010.

2009

  1. Kim*, H.J., and Beskok, A., “Numerical Modeling of Chaotic Mixing in Electroosmotically Stirred Continuous Flow Mixers,” ASME Journal of Heat Transfer, 131(9), 092403, 2009.

  2. Park‡, S., Koklu‡, M., Beskok, A., “Particle trapping in high conductivity media with electrothermally enhanced negative dielectrophoresis,” Analytical Chemistry, 81(6), pp 2303-2310, 2009.

  3. Celik‡, B., and Beskok, A., “Mixing induced by a transversely oscillating circular cylinder in a straight channel,” Physics of Fluids, 21(7), 073601, 2009.

  4. Hu, Q, Joshi, R.P., and Beskok, A. “Model study of electroporation effects on the dielectrophoretic response of spheroidal cells,” Journal of Applied Physics, Vol 106, 024701, 2009.

  5. Ai Y., Beskok A., Gauthier D., Joo S.W., and Qian S., “DC electrokinetic transport of cylindrical cells in straight microchannels,” Biomicrofluidics, 3, 044110, 2009 (Also featured in the December 1, 2009 issue of Virtual Journal of Biological Physics Research).

2008

  1. Soni, K. and Balasubramanian*, A. and Pillai, S.D. and Beskok, A., “Zeta Potential of Selected Bacteria in Drinking Water When Dead, Starved, or Exposed to Minimal and Rich Culture Media,” Current Microbiology, 56(1): 93-97 2008.

  2. Bahukudumbi*, P., and Beskok, A. “Quantification of Energy Dissipation for Laterally Oscillating Microstructures,” Physics of Fluids, Vol 20(3), 033603, 2008 (Also featured in April 7, 2008 issue of Virtual Journal of Nanoscale Science & Technology).

  3. Park*, S., Beskok, A., “Alternating current electrokinetic motion of colloidal particles on interdigitated microelectrodes,” Analytical Chemistry, Vol 80(8): 2832-2841, 2008.

  4. Kim*, B., Beskok, A., Cagin, T. “Thermal Interactions in Nanoscale Fluid Flow—Molecular Dynamics Simulations with Solid-Liquid Interfaces,” Microfluidics and Nanofluidics, Volume: 5(4): 551-559, 2008.

  5. Celik‡, B., Akdag‡, U., Gunes*, S., and Beskok, A., “Flow Past an Oscillating Circular Cylinder in a Channel with an Upstream Splitter Plate,” Physics of Fluids, Vol 20(10), 103603, 2008.

  6. Kim*, B., Beskok, A., Cagin, T. “Molecular Dynamics Simulations of Thermal Resistance at the Liquid-Solid Interface,” Journal of Chemical Physics, 129, 174701, 2008 (Also featured in November 17, 2008 issue of Virtual Journal of Nanoscale Science & Technology).

2007

  1. Hahm*, J., Balasubramanian*, A., and Beskok, A., “Flow and Species Transport Control in Grooved Micro-Channels Using Local Electrokinetic Forces,” Physics of Fluids, 19, 013601 2007.

  2. Bahukudumbi*, P., and Everett, W.N., and Beskok, A., Huff, G.H., and Lagoudas, D., and Ounaies, Z., and Bevan, M. “Colloidal Microstructures, transport, and Impedance Properties within Interfacial Microelectrodes,” Applied Physics Letters, 90 224102, 2007. (Reprinted in June 11, 2007 issue of Virtual Journal of Nanoscale Science & Technology).

  3. Balasubramanian*, A. and Pillai, S.D. and Beskok, A., “In-situ analysis of bacterial capture in a microfluidic channel,” Journal of Micromechanics and Microengineering, 1467-1478, (17) 2007.

  4. Balasubramanian*, A. and Soni, K. and Pillai, S.D. and Beskok, A., “A Microfluidic Device for Continuous Capture of Pathogens from Water,” Lab on a Chip, Vol 7, 1315-1321, 2007.

  5. Kim*, H.J., and Beskok, A., “Quantification of Chaotic Strength and Mixing in a Microfluidic System,” Journal of Micromechanics and Microengineering (17) 2197-2210, 2007. (Featured in IoP Select, a special collection of journal articles published by the Institute of Physics).

  6. Kumar*, S., Kim*, H.J., and Beskok, A., “Numerical Simulations of Peristaltic Mixing,” Journal of Fluids Engineering, Vol 129 1361-1371, 2007.

1994-2006

  1. Beskok, A., and Karniadakis G.E., “Simulation of Heat and Momentum Transfer in Complex Micro-Geometries,” Journal of Thermophysics and Heat Transfer, Volume 8, Number 4, pp. 647-655, 1994.

  2. Beskok, A., Trimmer W., and Karniadakis G.E., “Rarefaction and Compressibility Effects in Gas Micro-Flows,” Journal of Fluids Engineering, Vol. 118, pp. 448-456, 1996. (with 74 citations, designated as the 17th highly cited reference in MEMS area out of 3906 papers published between 1994-2004, by the ISI Essential Science Indicators rankings http://www.esi-topics.com/mems/papers/map.html).

  3. Beskok, A., and Karniadakis, G.E. “A Model for Flows in Channels, Pipes and Ducts at Micro and Nano Scales,” Microscale Thermophysical Engineering, Vol. 3, No: 1, pp. 43-77 1999.

  4. Beskok, A., and Warburton, T.C., “Arbitrary Lagrangian Eulerian Analysis of a Bi-Directional Micro-Pump Using Spectral Elements,” Int. J. of Computational Engineering Science, Vol. 2. No 1, pp: 43-57, 2001.

  5. Beskok, A., and Srinivasa, A., “Design and Analysis of a Simple Magneto-Elastic Pump,” Journal of Fluids Engineering, Technical Note, Vol. 123, No: 2, pp. 435-438, 2001.

  6. Sert*, C., and Beskok, A., “Shear Layer Instability and Mixing in Micro Heat Spreaders,” ASME J. of Heat Transfer, Photo Gallery Paper, Vol. 123, No. 4, pp: 621, August 2001.

  7. Dutta*, P., and Beskok, A., “Analytic Solution of Combined Electroosmotic/Pressure Driven Flows in Two- Dimensional Straight Channels: Finite Debye Layer Effects,” Analytical Chemistry, 73(9); 1979-1986, 2001.

  8. Dutta*, P. and Beskok, A., “Time Periodic Electroosmotic Flows: Analogies to Stokes' Second Problem,” Analytical Chemistry, 73(21); 5097-5102, 2001.

  9. Beskok, A., “Validation of a New Slip Model for Separated Gas Micro-Flows,” Numerical Heat Transfer: Fundamentals, 40 (6): 451-471, December 2001.

  10. Beskok, A. and Warburton, T.C., “An Unstructured H/P Finite Element Scheme for Fluid Flow and Heat Transfer in Moving Domains,” Journal of Computational Physics, 174, 492-509, 2001.

  11. Dutta*, P., Beskok, A., and Warburton T.C., “Electroosmotic Flow Control in Complex Micro-Geometries,” Journal of MEMS, Vol 11, no 1, 36-44, February 2002.

  12. Dutta*, P., Beskok, A., and Warburton T.C., “Numerical Simulation of Mixed Electroosmotic/ Pressure Driven Flows in Complex Micro-Geometries,” Numerical Heat Transfer: Part A, 41, 131-148, 2002.

  13. Ahmed*, I. and Beskok, A., “Rarefaction Compressibility and Viscous Heating in Gas Micro Filters,” AIAA Journal of Thermophysics and Heat Transfer, Vol 16, no 2, 161-170, 2002.

  14. Sert*, C. and Beskok, A., “Time-Periodic Forced Convection in Micro Heat Spreaders,” Numerical Heat Transfer: A, Vol.  42, No 7, 685 - 705, 2002.

  15. Kim, M.J., Kihm, K.D., and Beskok, A., “Electro-Osmosis-Driven Micro-Channel Flows: A Comparative Study of Microscopic Particle Image Velocimetry Measurements and Numerical Simulations,” Experiments in Fluids, 33, 170-180, 2002.

  16. Holden, M.A., Kumar*, S., Beskok A., Cremer P.S., “Microfluidic Diffusion Diluter: Bulging of PDMS Microchannels Under Pressure Driven Flow,” Journal of Micro Mechanics and Micro Engineering, Vol 13, 412 - 418, 2003.

  17. Holden, M.A., Kumar*, S., Castellana, E, Beskok A., Cremer P.S., “Generating Fixed Concentration Arrays in a Microfluidic Device,” Sensors and Actuators B, Vol 92, 1999-207, 2003.

  18. Sert*, C. and Beskok, A., “Numerical Simulation of Reciprocating Flow Forced Convection in Two Dimensional Channels,” ASME Journal of Heat Transfer Vol 125(3), 403-412, 2003.

  19. Kumar*, S., Beskok A., “Heat and Mass Transfer in a Peristaltic Micro Mixer,” ASME Journal of Heat Transfer, Photo Gallery Paper, Vol 125(4), 548, 2003.

  20. Bahukudumbi*, P., Park‡, J.H., and Beskok, A., “A Unified Engineering Model for Shear Driven Gas Micro Flows,” Microscale Thermophysical Engineering, Vol 7(4), 291-315. 2003.

  21. Bahukudumbi*, P., and Beskok, A., “A Phenomenological Lubrication Model for the Entire Knudsen Regime,” Journal of Micromechanics and Microengineering, Vol 13 No 6, 873-884, 2003.

  22. Park‡, J.H., Bahukudumbi*, P., and Beskok, A., “Rarefaction Effects on Shear Driven Oscillatory Flows: A DSMC Study in the Entire Knudsen Regime,” Physics of Fluids, Vol 16 No 2, pp. 317-330, 2004.

  23. Hahm*, J and Beskok, A., “On-Chip Multi-Species Detection Using Hydrodynamic/ Electrokinetic Focusing,” Bulletin of the Polish Academy of Sciences:  Technical Sciences, Vol 53, No 4, pp 325-334, 2005.

  24. Sert*, C. and Beskok, A., “Spectral Element Formulations on Nonconforming Grids: A Comparative Study of Pointwise Matching and Integral Projection Methods,” Journal of Computational Physics, 211 (1): 300-325 January 1 2006.

  25. Pillai, S.D., Beskok, A., Balasubrahmanian*, A., and Soni, K., “A Microfluidic Device for Capture and Concentration of Microorganisms in Recycled Water,” Habitation, Vol 10, No 3/4, pp 224, 2006.